bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_5046_orf1
Length=110
Score E
Sequences producing significant alignments: (Bits) Value
101510.RHA1_ro06649 60.5 1e-08
> 101510.RHA1_ro06649
Length=309
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query 7 DFTQDVLILAGDVHHELEGLKGSLELFCSGFGHVTFVPGNHELWVTHKDRDMGIGDSLQK 66
D +D LI+AGDV + + ++ +L+L S F V +VPGNHELW T KD G + +
Sbjct 28 DSPEDWLIVAGDVSEKTDDIRWALKLLRSRFAEVIWVPGNHELWTTAKDPVQIHGAA--R 85
Query 67 FDSILRLCESLGIHT 81
+D ++ +C +G+ T
Sbjct 86 YDYLVTMCREIGVIT 100
Lambda K H
0.323 0.142 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 23096258976
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40