bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_5022_orf1 Length=128 Score E Sequences producing significant alignments: (Bits) Value 51511.ENSCSAVP00000005802 111 7e-24 > 51511.ENSCSAVP00000005802 Length=342 Score = 111 bits (277), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 53/87 (60%), Positives = 67/87 (77%), Gaps = 0/87 (0%) Query 41 SADSSIPEELLTPESICYSLQEYLFGMLVEITERAMALSHSSDVLVVGGVGCNLRLQQML 100 +A++ I T E +C+SLQE +F MLVEITERAMA +SS+VL+VGGVGCNLRLQ+M+ Sbjct 216 AANTKIASGECTAEDLCFSLQETVFAMLVEITERAMAHCNSSEVLIVGGVGCNLRLQEMM 275 Query 101 REMARQRGCSMGGMDERYCIDNGAMIA 127 MA +RG + DER+CIDNGAMIA Sbjct 276 LVMASERGAKLYATDERFCIDNGAMIA 302 Lambda K H 0.319 0.133 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22424899233 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40