bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_4730_orf1
Length=245
Score E
Sequences producing significant alignments: (Bits) Value
5141.NCU01328.1 233 6e-60
> 5141.NCU01328.1
Length=692
Score = 233 bits (593), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 122/244 (50%), Positives = 157/244 (64%), Gaps = 3/244 (1%)
Query 3 HLGLGRLIVLYDSNKITIDGDTSLSFTENVLQRFNAYGWHTQTVKDGDRDISGILQAIRR 62
HL LG LI ++D N+ITIDGDT+ +FTE+VL+R+ +YGWH TV DGD ++ I AI++
Sbjct 176 HLQLGNLIAIWDDNRITIDGDTNQAFTEDVLKRYESYGWHIVTVLDGDNNLDLIADAIKK 235
Query 63 AKAVTDKPSLIEIKTTIGWGSQNEGTEKVHGAPLSADDIKQLKEKLGLNPNEDFHVPEDT 122
AK VTDKP+LI++KTTIG+GS+ +GT VHG+PL ADDIKQLKEK G NP E F VP++
Sbjct 236 AKEVTDKPTLIQLKTTIGFGSKKQGTHDVHGSPLKADDIKQLKEKFGFNPEESFAVPQEV 295
Query 123 RKFYAGVAARNKAEYDAWQTLFTKYGEAYPKEKQELGRMFGREVSEQVETALKDMAKAAA 182
+A+ A+ + W LF KY E + E +L R E+ E E L A
Sbjct 296 YDLCHKASAKGAAKEEEWNQLFAKYAEEFKAEHDDLIRRQKGELPEGWEKHLP--VYTPA 353
Query 183 DTPASTRVLSGKALNAIKDFMPELIGGSADLTTSNETRLKGETAFSPNPK-FGSYADRYI 241
D ++R LS LN I + +PEL+GGSADLT SN TR KG F P G+YA RY
Sbjct 354 DPAVASRKLSENVLNKIFEAVPELVGGSADLTGSNLTRWKGAIDFQPPATGLGTYAGRYF 413
Query 242 HFGV 245
FGV
Sbjct 414 RFGV 417
Lambda K H
0.314 0.132 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 72605294520
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40