bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Eten_4620_orf2
Length=184
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PFD0300c                                                        288    8e-77


> 5833.PFD0300c
Length=494

 Score =  288 bits (736),  Expect = 8e-77, Method: Compositional matrix adjust.
 Identities = 133/163 (81%), Positives = 146/163 (89%), Gaps = 0/163 (0%)

Query  4    RAGSITQFPILTMPNDDITHPIPDLTGYITEGQIFVDRALHNRQIYPPINVLPSLSRLMK  63
            R GSITQFPILTMPNDDITHPIPDLTGYITEGQIFVDR L+NRQIYPPINVLPSLSRLMK
Sbjct  328  RNGSITQFPILTMPNDDITHPIPDLTGYITEGQIFVDRNLYNRQIYPPINVLPSLSRLMK  387

Query  64   SGIGRGMTRDDHPAVSDQLYANYAIGQDTRAMKAVVGEEALSADDMLFMEFTDKFERRFL  123
            SGIG  MTR DHP VSDQLY+NYAI QD +AMKAV+GEEALS DD+L++EF DKFE+RF+
Sbjct  388  SGIGHNMTRIDHPYVSDQLYSNYAIAQDVKAMKAVIGEEALSNDDILYLEFLDKFEKRFI  447

Query  124  QQGPYEGRDIFQSLDIAWELLRTFPEDMLKKIQQQLLTKYYPR  166
             Q  YE RDI+QSLDIAWELLR FPEDMLKKI+  +L+KYYPR
Sbjct  448  TQNTYECRDIYQSLDIAWELLRIFPEDMLKKIKTDILSKYYPR  490



Lambda     K      H
   0.321    0.137    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 39517472064


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40