bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_4498_orf1 Length=236 Score E Sequences producing significant alignments: (Bits) Value 3702.AT4G02570.3 167 3e-40 > 3702.AT4G02570.3 Length=738 Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 87/234 (37%), Positives = 135/234 (57%), Gaps = 31/234 (13%) Query 4 QRAISTAPFCTLLASFCDRILRKAGGERMGDDEIEECLMKVVEIFNYVTDKDLFAEQYRT 63 + ++ + LLA+FCD IL+K G E++ D+ IE+ L KVV++ Y++DKDLFAE YR Sbjct 376 NKTVAGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVKLLAYISDKDLFAEFYRK 435 Query 64 QLGRRLLHETSASLELERLLIAKLRLKCGAHFTAKVEGMVNDLQVAAGLMRSFQQQQQEE 123 +L RRLL + SA+ + ER ++ KL+ +CG FT+K+EGMV DL +A SF Sbjct 436 KLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQNSF------- 488 Query 124 QLKRKTDEQESKVNESASRIKESVSSATVETVMIGDVEFSVQALSTAHWPTYPAPDLRLP 183 E N +A+ ++ +V L+T WP+Y + D+ LP Sbjct 489 -------EDYLGSNPAAN----------------PGIDLTVTVLTTGFWPSYKSFDINLP 525 Query 184 PQLAQCVNAFEQFYTSQTQHRKLTWVNSLGTALVAAQLQNRQ-DLICNTMQAAL 236 ++ +CV F+ FY ++T+HRKLTW+ SLGT + + + +LI +T QAA+ Sbjct 526 SEMIKCVEVFKGFYETKTKHRKLTWIYSLGTCHINGKFDQKAIELIVSTYQAAV 579 Lambda K H 0.319 0.130 0.367 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 68043068464 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40