bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_4371_orf2 Length=148 Score E Sequences producing significant alignments: (Bits) Value 3702.AT1G48030.1 214 8e-55 > 3702.AT1G48030.1 Length=507 Score = 214 bits (544), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 104/147 (70%), Positives = 121/147 (82%), Gaps = 1/147 (0%) Query 1 AHKAEEEGIACVERLAGKGDGTVRHDTIPAVIYTHPELAGVGKTEEQLKAEGVVYKRGAF 60 AHKAEE+G+ACVE +AGK G V +D +P V+YTHPE+A VGKTEEQLK EGV Y+ G F Sbjct 362 AHKAEEDGVACVEFIAGK-HGHVDYDKVPGVVYTHPEVASVGKTEEQLKKEGVSYRVGKF 420 Query 61 PFAANSRARATGDSDGLVKVLTCKETDKILGVWILGPNAGELIAEAVLAMEYGASSEDLG 120 PF ANSRA+A +++GLVK+L KETDKILGV I+ PNAGELI EAVLA+ Y ASSED+ Sbjct 421 PFMANSRAKAIDNAEGLVKILADKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIA 480 Query 121 RVCHAHPTQSEALKEACMACFDKPIHI 147 RVCHAHPT SEALKEA MA +DKPIHI Sbjct 481 RVCHAHPTMSEALKEAAMATYDKPIHI 507 Lambda K H 0.316 0.133 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22943761524 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40