bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_4347_orf1 Length=100 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL3P7.35 129 2e-29 > 5833.MAL3P7.35 Length=262 Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 66/101 (65%), Positives = 78/101 (77%), Gaps = 2/101 (1%) Query 1 IRAIRKKMVSIMAAEASKCQLRDLVKKFIPESIGKSIEAACRSIFPLQNVLIRKVKVIKK 60 I+ IRKKMV IM AEASK L+DLVKKFIPESIGK IE C+ I+PLQNVLIRKVK++K+ Sbjct 161 IKKIRKKMVDIMTAEASKVLLKDLVKKFIPESIGKEIEKQCKKIYPLQNVLIRKVKILKR 220 Query 61 PKFDLSKLMELHGETSEDVGKKVAT--ESAAAQNTLSAEVK 99 PK D+SKLMELH + E+ GK V ES A N L+AE+K Sbjct 221 PKLDISKLMELHTDPKEESGKNVNALPESKEATNILTAELK 261 Lambda K H 0.316 0.128 0.334 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23067334887 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40