bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_4260_orf1 Length=179 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd7_1710 248 5e-65 > 5807.cgd7_1710 Length=763 Score = 248 bits (633), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 109/179 (60%), Positives = 138/179 (77%), Gaps = 0/179 (0%) Query 1 GSCKLQILKFVSPEAQNVFWHSSAHILGQAMECEFGALLTVGPALKPGFYYDCYMGQKSL 60 G C+L+IL F S E VFWHSS+HILGQ +E E+GA +T+GPAL PGFYYD YMG S+ Sbjct 146 GDCELEILTFDSLEGSGVFWHSSSHILGQCLENEYGAQVTIGPALNPGFYYDSYMGTHSV 205 Query 61 SESEHGALNAAAQRIVSEAQPFERLVCTKEEALEMFAENPFKVALITTKVPDGGLTTVYR 120 S +E+ + A+ I+SE Q FERL C KEEALE+F +NPFKV+LI +K+PDG TT+YR Sbjct 206 SNTEYSDIENCAKTIISEKQQFERLQCNKEEALELFKDNPFKVSLIMSKIPDGAQTTIYR 265 Query 121 CGTLVDICRGPHVPTTALCKSFSVTRHSAAYWLGNRSNDSLQRVYGVSFPEKKQLTEYL 179 CG+ VD+C GPH+P T + K+F VT++S WLGN ND+LQRVYGVSFP+KK+L EYL Sbjct 266 CGSFVDLCTGPHIPHTGIVKAFKVTKNSGCNWLGNTENDALQRVYGVSFPDKKRLDEYL 324 Lambda K H 0.320 0.134 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 36430169559 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40