bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_4241_orf2 Length=184 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL3P2.4 62.0 1e-08 > 5833.MAL3P2.4 Length=593 Score = 62.0 bits (149), Expect = 1e-08, Method: Composition-based stats. Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 3/101 (2%) Query 47 FLEKGGLQVIEFRRKLKWLYPFAFFAEFPESRQKPLFEFPQGQLERSLDLLPEKLETFEP 106 F E +Q+I+ R+ LKW Y +A+F+ + QK LFE+ QG+LE++LD+L K E Sbjct 496 FFEDAIIQIIKCRKILKWSYTYAYFSNWKSDNQKHLFEYHQGELEKNLDILQTKTEDINL 555 Query 107 KGYFYRDPADFFTFKKQLLDLTAVVRGFFAKIFDVFEEEFL 147 +++ D T + + +T ++ FF I + E F+ Sbjct 556 TQ--FKNNTDNDTV-RDIQQITQMIDIFFKNICEFMENNFV 593 Lambda K H 0.323 0.147 0.472 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 39517472064 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40