bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_4181_orf2 Length=212 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd7_950 239 4e-62 > 5807.cgd7_950 Length=473 Score = 239 bits (610), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 110/143 (76%), Positives = 130/143 (90%), Gaps = 0/143 (0%) Query 70 MAKGIRFLSLVKPAMCVLPEVHAPERRVLFREKVLWTLLALAVFLVCCQIPLFGIRGGRG 129 MAKG+RFL+L+KPA+CV+PEV +P+RRV F+E+VLWTL++L VFLVCCQIPL+G+ + Sbjct 1 MAKGLRFLNLIKPALCVIPEVSSPDRRVPFKERVLWTLISLFVFLVCCQIPLYGVLSSKS 60 Query 130 ADPFYWMRVILASNRGTLMELGISPIVTSGMVMQLLAGSRIIQVDQSLREDRALFQGAQK 189 +DPFYW+RVILASNRGTLMELGISPIVTS MVMQLLAGS+II VDQSL+EDRALFQGAQK Sbjct 61 SDPFYWVRVILASNRGTLMELGISPIVTSSMVMQLLAGSKIIDVDQSLKEDRALFQGAQK 120 Query 190 LLALLITIXEAVAYVISGMYGPV 212 L LLIT+ EAVAYVISGMYG + Sbjct 121 LFGLLITLGEAVAYVISGMYGDI 143 Lambda K H 0.325 0.137 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 54290949897 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40