bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_4089_orf1
Length=240
Score E
Sequences producing significant alignments: (Bits) Value
3702.AT3G21280.1 140 3e-32
> 3702.AT3G21280.1
Length=532
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 127/222 (57%), Gaps = 22/222 (9%)
Query 19 AVKWGAKSF-NVQIDPNEPLEVFQAQLYTLTGVPVERQKLLCKGKTIKVDADLQALVSSG 77
+VKW K F +++ID ++P VF+AQLY L+GVP ERQK++ KG +K DAD L
Sbjct 60 SVKWQKKVFESIEIDTSQPPFVFKAQLYDLSGVPPERQKIMVKGGLLKDDADWSTLGLKN 119
Query 78 CPKIMLMGTAEEKTAVKPPPEKTVFVEDLTPAQQAALLKEKKVEPLPNGIVNLGNTCYLA 137
K+M+MGTA+E VK P + VF+EDL QQAA L G+VNLGNTCY+
Sbjct 120 GQKLMMMGTADE--IVKAPEKGPVFMEDLPEEQQAANLG------YSAGLVNLGNTCYMN 171
Query 138 SVLQMLRPAKDFSDLLKNYISGGAATAQFAATGQQGALRRLSLALKDFYNQWDQTVEAVS 197
S +Q L + L NY S A T T L++A ++ +++ D++V+AV+
Sbjct 172 STMQCLISVPELKSELSNYQS--ARTKDVDQTSHM-----LTVATRELFSELDKSVKAVA 224
Query 198 PFLLVPTLREAYPQFSRRSTSQAGTTGVPMQQDAEECLSCLM 239
P L++ YPQF++ G MQQDAEEC + ++
Sbjct 225 PMPFWMVLQKKYPQFAQLH------NGNHMQQDAEECWTQML 260
Lambda K H
0.316 0.130 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 70473178052
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40