bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_4016_orf1 Length=273 Score E Sequences producing significant alignments: (Bits) Value 5833.PFL1545c 298 1e-79 > 5833.PFL1545c Length=702 Score = 298 bits (763), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 133/247 (53%), Positives = 189/247 (76%), Gaps = 0/247 (0%) Query 1 RVTLGPRGRNVLLEKDYGPPLIVNDGVTIARNIELPNRAHNAGAKLVQEVASTSDEWAGD 60 ++TLGPRGRNVLLEK+YG PLI+NDGVTIA+NI L +R N G KL+QE + S++ AGD Sbjct 94 KLTLGPRGRNVLLEKEYGSPLIINDGVTIAKNISLKDRKKNNGVKLMQESTNISNDKAGD 153 Query 61 GTSSTTILTAEIAKKGVEYVNQGHNPIPLQRGIQKAARIMMDEVKKLAKPVNGFGDLLNI 120 GTSST ++TA I KKG+E VN+ HNPIP+QRGIQ A++++++++K L+ P+ + D+LNI Sbjct 154 GTSSTALMTATITKKGIEQVNRNHNPIPIQRGIQLASKMIIEKIKSLSTPIKTYKDILNI 213 Query 121 ATVATSGNASMGEVIAKAFDKLGNHAAIVLENNPSQEDNLEFTEGYTFERGYSSPYFLLG 180 AT+A++ + MG++IA A+DKLG +AAI+L++N D LEFTEGY F+RG +PY L Sbjct 214 ATIASNNDVHMGQIIANAYDKLGKNAAIILDDNADINDKLEFTEGYNFDRGIINPYLLYN 273 Query 181 EEADFIEWKNPHVMVCDYKIESAQAMLPILEHFVRTKEPLVIIAEDFSTDMLQTCIINSM 240 E D+IE+ N ++ D I++ Q++LPILE F + K+PL IIA+DFS ++LQT IIN + Sbjct 274 ENKDYIEYSNVSTLITDQNIDNIQSILPILEIFAKNKQPLCIIADDFSNEVLQTLIINKL 333 Query 241 RRLLIVV 247 + + VV Sbjct 334 KGAIKVV 340 Lambda K H 0.317 0.134 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 88576444215 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40