bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3942_orf3 Length=210 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL13P1.190 213 3e-54 > 5833.MAL13P1.190 Length=503 Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 104/210 (49%), Positives = 152/210 (72%), Gaps = 0/210 (0%) Query 1 RLAALKKCIVVELLMGDIPERPLFNKQNMHAELVPYREIVLAVRSGDLHAFASVLQQHEQ 60 +LAA K IVVELLMGDIP+R +F+ + M+ +L+PY+ +V AVR+GD++ FA V+ + Sbjct 294 KLAATKMEIVVELLMGDIPDRSIFSNKIMYKKLIPYKHVVSAVRNGDINKFAQVMNNYTD 353 Query 61 RFRLDDTYTLLCRLHQNVIRAGLRIISLSYSRIYLKDIAKKLGLDSAKEAEAVAGKAILD 120 F D Y L+ R+H NVI+ LRII+LSYSRI + DI KK+G++S+ + + KAI D Sbjct 354 LFIHDGVYLLIKRIHHNVIKTALRIINLSYSRISINDIGKKIGIESSLDVVGITAKAIHD 413 Query 121 RVIDASIDHDKQFLQSKASVDLYASNEPQKAFHRRITFCLDLYNDAVKAMQYPGSTERQQ 180 VI+ +ID++ Q+++SK++ D+Y + +P K FH+RI FCL LY+DA+KAMQYP E+++ Sbjct 414 GVIEGTIDYENQYVESKSNSDIYITGDPMKTFHKRIAFCLQLYSDAIKAMQYPDENEKKE 473 Query 181 TAEDDERKRAMQEERARAEDEDLGDDMDMI 210 E ERK QEE A+AE+ DLGDD D++ Sbjct 474 NEEAKERKMRQQEELAQAEEGDLGDDNDLL 503 Lambda K H 0.321 0.135 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 53070928551 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40