bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3841_orf1 Length=246 Score E Sequences producing significant alignments: (Bits) Value 5833.PFF0590c 146 7e-34 > 5833.PFF0590c Length=656 Score = 146 bits (368), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 72/254 (28%), Positives = 141/254 (55%), Gaps = 15/254 (5%) Query 3 EATWEHRRDSWNNYALLVEFLADTTLAKD------RETITLPLQWVWDMLDEFVYQFQET 56 + T E R++SW+NY L+ F+ TT+ D + +P W++D L E++YQ+Q Sbjct 99 DITLEDRKNSWDNYKCLLNFI--TTICTDLSGDSNDNVLVMPNVWIYDFLSEYIYQYQSM 156 Query 57 SRWLQRRCKSLADSPDRKRLIAELEGDLEVWPAFRVFELLQKVVQQSGIKEQLQQQRADP 116 + R + L D + I + + EV+ + VFE+L ++ + ++++ Sbjct 157 CHY---RLQLLKDLEKNEEGILFVTRNTEVFESSIVFEVLHNLLLKGEFSTLPLEEKSTF 213 Query 117 MAPKAAETEL----GFQLGYFALILQLKLHVQVGLFHAGVAAVNDIELSPKAFYWRVPVA 172 + +Q YFA + L L+V +G ++ + +++IEL+ KA YW+V + Sbjct 214 VNNIYNINNEEINSKYQFAYFACCILLNLYVLIGDYYTALKIISNIELNHKALYWKVTLC 273 Query 173 HYSFIFHLGFAYMMLRRYQDAIRVMSQALLALSRQRGQLASSSSYQGASMSRSADRMHVL 232 H S +++ F+YMML+RY D+I+V+SQ L+ LS+Q+ +++ YQ + + D+M+++ Sbjct 274 HLSIFYNIAFSYMMLKRYNDSIKVLSQILIYLSKQKIHVSNQQKYQQNLIHKLIDKMYLI 333 Query 233 LLLCSKLSGIKLDD 246 +++C L+ +LD+ Sbjct 334 IIICHSLTNTRLDE 347 Lambda K H 0.324 0.135 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 73210338641 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40