bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_3778_orf1
Length=115
Score E
Sequences producing significant alignments: (Bits) Value
5207.CNF03140 63.2 2e-09
> 5207.CNF03140
Length=1484
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 0/66 (0%)
Query 50 EYAVGDKVWLSSNHLPPFNSCPKFEPRYRGPFEIIGRIGTVAYRLALPPTYECHEGFHVS 109
EY +GDKVWLS+ ++ K + RY GP+ II R+ + AYRL LP + H+ FHV
Sbjct 1343 EYTIGDKVWLSARNIKTKRPTKKLDHRYLGPYTIIARVSSHAYRLELPKSMRIHDVFHVQ 1402
Query 110 QLVSHL 115
L ++
Sbjct 1403 LLEKYI 1408
Lambda K H
0.324 0.139 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22698934816
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40