bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3721_orf1 Length=449 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd8_840 644 0.0 > 5807.cgd8_840 Length=406 Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust. Identities = 301/371 (81%), Positives = 338/371 (91%), Gaps = 0/371 (0%) Query 79 EEERARALRAYVAKIKEHREWAARVKKLREETKLQSKKYEKTEDDLKALQGVGQLIGEVL 138 E+E L Y K+KEHRE +KK R E + SK Y+KTEDDLKALQ VGQ+IGEVL Sbjct 19 EDEHKNTLATYAQKVKEHRELEVSLKKKRMEIRELSKVYDKTEDDLKALQSVGQIIGEVL 78 Query 139 RQLDSEKFIVKTSSGPRYVVGSKPKLDKSLLTAGTRVALDMTTLTVMRRLQREVDPLVFN 198 R LD EK IVK S+GPRYVVG + KLDKS LT+GTRVALD TTLT+MRRL REVDP+V+N Sbjct 79 RHLDDEKCIVKASTGPRYVVGCRSKLDKSKLTSGTRVALDATTLTIMRRLPREVDPMVYN 138 Query 199 MLHEDPGNVHYSEVGGLSEQIRQMREVVELPLTNPELFKRVGIKTPKGVLLYGPPGTGKT 258 MLHEDPG+V YS+VGGL+EQIR++REV+ELPLTNPELFKRVGIKTPKGVLLYGPPGTGKT Sbjct 139 MLHEDPGSVSYSQVGGLNEQIREIREVIELPLTNPELFKRVGIKTPKGVLLYGPPGTGKT 198 Query 259 LLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQPCIIFMDEIDAIGGR 318 LLARAMAS+M+CNFMKVVASAIVDKYIGESARVIREMFGYAKDHQPC+IFMDEIDAIGG+ Sbjct 199 LLARAMASSMNCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQPCVIFMDEIDAIGGK 258 Query 319 RFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDPALMRPGRLDRKIEI 378 RFSQGTSADREIQRTLMELLNQLDGFDELG VKIIMATNRPDVLDPAL+RPGRLDRK+EI Sbjct 259 RFSQGTSADREIQRTLMELLNQLDGFDELGAVKIIMATNRPDVLDPALLRPGRLDRKVEI 318 Query 379 PMPNESARIDILKIHSSKIAKSGDIDFEAICRLCDGFNGADLRNVCTEAGMFAIRADRDY 438 P+PNE++R++ILKIHSSK+AK G+IDF+AIC+LCDGFNGAD+RNVC+EAGMFAIRA+RDY Sbjct 319 PLPNETSRVEILKIHSSKLAKQGEIDFDAICKLCDGFNGADMRNVCSEAGMFAIRAERDY 378 Query 439 VIEEDFFKAAR 449 +IEEDF KA R Sbjct 379 IIEEDFLKAVR 389 Lambda K H 0.320 0.135 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 187665939870 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40