bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_3721_orf1
Length=449
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd8_840 644 0.0
> 5807.cgd8_840
Length=406
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/371 (81%), Positives = 338/371 (91%), Gaps = 0/371 (0%)
Query 79 EEERARALRAYVAKIKEHREWAARVKKLREETKLQSKKYEKTEDDLKALQGVGQLIGEVL 138
E+E L Y K+KEHRE +KK R E + SK Y+KTEDDLKALQ VGQ+IGEVL
Sbjct 19 EDEHKNTLATYAQKVKEHRELEVSLKKKRMEIRELSKVYDKTEDDLKALQSVGQIIGEVL 78
Query 139 RQLDSEKFIVKTSSGPRYVVGSKPKLDKSLLTAGTRVALDMTTLTVMRRLQREVDPLVFN 198
R LD EK IVK S+GPRYVVG + KLDKS LT+GTRVALD TTLT+MRRL REVDP+V+N
Sbjct 79 RHLDDEKCIVKASTGPRYVVGCRSKLDKSKLTSGTRVALDATTLTIMRRLPREVDPMVYN 138
Query 199 MLHEDPGNVHYSEVGGLSEQIRQMREVVELPLTNPELFKRVGIKTPKGVLLYGPPGTGKT 258
MLHEDPG+V YS+VGGL+EQIR++REV+ELPLTNPELFKRVGIKTPKGVLLYGPPGTGKT
Sbjct 139 MLHEDPGSVSYSQVGGLNEQIREIREVIELPLTNPELFKRVGIKTPKGVLLYGPPGTGKT 198
Query 259 LLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQPCIIFMDEIDAIGGR 318
LLARAMAS+M+CNFMKVVASAIVDKYIGESARVIREMFGYAKDHQPC+IFMDEIDAIGG+
Sbjct 199 LLARAMASSMNCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQPCVIFMDEIDAIGGK 258
Query 319 RFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDPALMRPGRLDRKIEI 378
RFSQGTSADREIQRTLMELLNQLDGFDELG VKIIMATNRPDVLDPAL+RPGRLDRK+EI
Sbjct 259 RFSQGTSADREIQRTLMELLNQLDGFDELGAVKIIMATNRPDVLDPALLRPGRLDRKVEI 318
Query 379 PMPNESARIDILKIHSSKIAKSGDIDFEAICRLCDGFNGADLRNVCTEAGMFAIRADRDY 438
P+PNE++R++ILKIHSSK+AK G+IDF+AIC+LCDGFNGAD+RNVC+EAGMFAIRA+RDY
Sbjct 319 PLPNETSRVEILKIHSSKLAKQGEIDFDAICKLCDGFNGADMRNVCSEAGMFAIRAERDY 378
Query 439 VIEEDFFKAAR 449
+IEEDF KA R
Sbjct 379 IIEEDFLKAVR 389
Lambda K H
0.320 0.135 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 187665939870
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40