bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3699_orf1 Length=143 Score E Sequences producing significant alignments: (Bits) Value 5833.PF13_0156 129 3e-29 > 5833.PF13_0156 Length=270 Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 70/141 (49%), Positives = 85/141 (60%), Gaps = 22/141 (15%) Query 2 FKMGSVEQLQRQLGGFDFSNHCRNVSLLLRSAAASSSASSSTGVPSAAAAGSFRMPPLRK 61 K+ + L+ + GG++F N RN L GV + P RK Sbjct 1 MKLEYINILKEENGGYNFDNLKRNEIL------------KEKGV---------KFPQFRK 39 Query 62 TGTTICGVIFQDGVVLGADTRATEGPLVADKNCNKLHKISSNIYAAGAGTAADLDHMCDW 121 TGTTICG++ Q+ V+LGADTRATEGP+VADKNC+KLH IS NI+ AGAG A DL+H W Sbjct 40 TGTTICGLVCQNAVILGADTRATEGPIVADKNCSKLHYISKNIWCAGAGVAGDLEHTTLW 99 Query 122 LATQVELHRLNTYAKQARVSM 142 L VELHRLNT Q RVSM Sbjct 100 LQHNVELHRLNT-NTQPRVSM 119 Lambda K H 0.318 0.128 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22654093455 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40