bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_3688_orf1
Length=218
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF13_0301 242 5e-63
> 5833.PF13_0301
Length=202
Score = 242 bits (618), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 124/197 (62%), Positives = 152/197 (77%), Gaps = 5/197 (2%)
Query 24 ARLEKELLGLQQDREG--KANDDEHDVYAEKWDTDISHWRGRIKGPLDTPYEGGVFILDI 81
+R KELL LQ++ + K N DE D + + DT+I W G IKGP TPYEGG FILDI
Sbjct 5 SRSSKELLRLQKELKDIEKENVDEIDAHMK--DTNIFEWVGFIKGPSGTPYEGGHFILDI 62
Query 82 NIPSDYPYNPPKINFVTKVWHPNVSSQTGAICLDILKHEWSPALSIRTALLSIQAMLADP 141
IP+DYPYNPPKI F TK+WHPN+SSQTGAICLD+LK+EWSPAL+IRTALLSIQA+L+DP
Sbjct 63 TIPNDYPYNPPKIKFNTKIWHPNISSQTGAICLDVLKNEWSPALTIRTALLSIQALLSDP 122
Query 142 VPTDPQDAEVAKMLIENPDLFQKTARHWTETFA-MNSTESQEDKVKKLADMGFDKETART 200
P DPQDAEVAKM EN L+ KTA WT+TFA + E +ED +KK+ +MGF ++ A+
Sbjct 123 QPDDPQDAEVAKMYKENYSLYLKTASVWTKTFATVPKLEPREDIIKKITEMGFSEDQAKK 182
Query 201 ALMNANWDETSALNSLL 217
AL+ ANW+ET ALN+LL
Sbjct 183 ALIKANWNETLALNTLL 199
Lambda K H
0.315 0.132 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 57951013935
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40