bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3688_orf1 Length=218 Score E Sequences producing significant alignments: (Bits) Value 5833.PF13_0301 242 5e-63 > 5833.PF13_0301 Length=202 Score = 242 bits (618), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 124/197 (62%), Positives = 152/197 (77%), Gaps = 5/197 (2%) Query 24 ARLEKELLGLQQDREG--KANDDEHDVYAEKWDTDISHWRGRIKGPLDTPYEGGVFILDI 81 +R KELL LQ++ + K N DE D + + DT+I W G IKGP TPYEGG FILDI Sbjct 5 SRSSKELLRLQKELKDIEKENVDEIDAHMK--DTNIFEWVGFIKGPSGTPYEGGHFILDI 62 Query 82 NIPSDYPYNPPKINFVTKVWHPNVSSQTGAICLDILKHEWSPALSIRTALLSIQAMLADP 141 IP+DYPYNPPKI F TK+WHPN+SSQTGAICLD+LK+EWSPAL+IRTALLSIQA+L+DP Sbjct 63 TIPNDYPYNPPKIKFNTKIWHPNISSQTGAICLDVLKNEWSPALTIRTALLSIQALLSDP 122 Query 142 VPTDPQDAEVAKMLIENPDLFQKTARHWTETFA-MNSTESQEDKVKKLADMGFDKETART 200 P DPQDAEVAKM EN L+ KTA WT+TFA + E +ED +KK+ +MGF ++ A+ Sbjct 123 QPDDPQDAEVAKMYKENYSLYLKTASVWTKTFATVPKLEPREDIIKKITEMGFSEDQAKK 182 Query 201 ALMNANWDETSALNSLL 217 AL+ ANW+ET ALN+LL Sbjct 183 ALIKANWNETLALNTLL 199 Lambda K H 0.315 0.132 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 57951013935 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40