bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_3676_orf3
Length=264
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF08_0121 196 8e-49
> 5833.PF08_0121
Length=217
Score = 196 bits (497), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/223 (45%), Positives = 134/223 (60%), Gaps = 45/223 (20%)
Query 43 SRPLTDPSNPVVFLDVSVGSHAMGRIKIELFKHLMPKCAENFRQFCTGEHKMNSVPVGYK 102
S LT+PSNPVVF+D+++G+H +G+ K ELF++++P+ +ENFR+FCTGEHK+N++PVGYK
Sbjct 39 SNLLTNPSNPVVFMDINLGNHFLGKFKFELFQNIVPRTSENFRKFCTGEHKINNLPVGYK 98
Query 103 NVKFHRVLKGFMIHGGDFVKGDGTGSLSIYGSSFPLEAPPPPEAIQGLTGSAATAAAAKA 162
N FHRV+K FMI GGDFV +G+G +SIYG F E
Sbjct 99 NTTFHRVIKDFMIQGGDFVNYNGSGCISIYGEHFDDE----------------------- 135
Query 163 IAAGSVPHFRAGLLCMANSAASSSKQQQQPQDPKQQQQRSGTNGCQFFITCGSCLWLDGR 222
+ H + GLL MAN+ + TNGCQFFI C WLDG+
Sbjct 136 --NFDIKHDKEGLLSMANTGPN-------------------TNGCQFFIITKKCEWLDGK 174
Query 223 NDVFGQVIGRDSYQVLRKIEHVS-TDAQGMPKVDITITECGEL 264
N VFG++I DS +L+KIE+VS T PK+ I I ECGEL
Sbjct 175 NVVFGRIIDNDSLILLKKIENVSVTPYIYKPKIAINIVECGEL 217
Lambda K H
0.319 0.135 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 83153396610
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40