bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_3650_orf1
Length=175
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF14_0195 70.9 2e-11
> 5833.PF14_0195
Length=1449
Score = 70.9 bits (172), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 15/148 (10%)
Query 29 LKSLYGDQILPTAFNLKGRLLENGCSAQVATNFLSYYKQMKDTCVVDCVSSSSSSSSSSG 88
L+SLY D+ILP FN+KGR E + N + Y + ++ + SG
Sbjct 1193 LESLYEDRILPLLFNIKGRADEYEYREILRNNIKTAYSLYPEKYII--------KPNESG 1244
Query 89 SSGGSSREPVVYLLLPPPDHRGWIDANDPNDPYPTLMWESFFEFIQSSAFSQCSRL-RIG 147
+ ++Y ++ N+ D Y + +W+ F E+++ + S+ + L
Sbjct 1245 D------DYIIYFTNKKVSEDYFMSINNLKDIYSSNLWKQFEEYLEEISKSEDATLYTFS 1298
Query 148 GGRYGMACFLRRLDLPFFRAFSLGQLCH 175
GGRYGMA L++ +LPFF+ LGQLCH
Sbjct 1299 GGRYGMAKELKKRNLPFFQGLFLGQLCH 1326
Lambda K H
0.321 0.136 0.453
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 34716851512
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40