bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3624_orf1 Length=147 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd8_2330 157 6e-38 > 5807.cgd8_2330 Length=1143 Score = 157 bits (398), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 74/116 (63%), Positives = 90/116 (77%), Gaps = 2/116 (1%) Query 9 GHMNVLLAEADVPYKIVKEMSEVNPEMSSYDVVLVVGANDTVNPAALEPGSKISGMPVIE 68 GHMNVLLAEADVPY IVKEM +VNP M S+DVVLV+GANDTVNP ALE SKI+GMPVIE Sbjct 441 GHMNVLLAEADVPYSIVKEMEDVNPHMESFDVVLVIGANDTVNPLALEKDSKINGMPVIE 500 Query 69 AWKARRVFVLKRSMAAGYASIENPLFHLENTRMLFGNAKNTTSAVFARVNAVCASP 124 W+A +V V KRS+ GYA+I+NPLF ++N M+FGNAK++ + N + SP Sbjct 501 VWRASKVIVSKRSLGKGYAAIDNPLFFMKNVEMIFGNAKDSMINILQ--NIISISP 554 Lambda K H 0.317 0.131 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23033159460 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40