bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3606_orf1 Length=247 Score E Sequences producing significant alignments: (Bits) Value 9544.ENSMMUP00000026659 63.2 8e-09 > 9544.ENSMMUP00000026659 Length=520 Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 56/168 (33%), Positives = 81/168 (48%), Gaps = 19/168 (11%) Query 92 RPGPTG----MGFMAK----MEDVKEEARILALLDHPRCLKLKDVLDSNPESADGKVYF- 142 RP P G G AK +E V +E IL LDH +KL +VLD + A+ +Y Sbjct 173 RPPPRGSQAAQGGPAKQLLPLERVYQEIAILKKLDHVNVVKLIEVLD---DPAEDNLYLA 229 Query 143 ITNFLPGGALMVLNPMRDEELVRSCQLSSDAPEPVVADMSVTEDIIREKFTPQLETLRTF 202 + N L N + L+ S Q S + + M D++R+ ++ + F Sbjct 230 LQNQAQNIQLDSANIPKPHSLLPSEQQDSGS----IWAMRSVFDLLRKGPVMEVPCDKPF 285 Query 203 TEAQAKCFIRDAAEVHEHL---GICHRDLKVDNLLLGADGRVCVGDFG 247 +E QA+ ++RD E+L I HRD+K NLLLG DG V + DFG Sbjct 286 SEEQARLYLRDVILGLEYLHFQKIVHRDIKPSNLLLGDDGHVKIADFG 333 Lambda K H 0.321 0.136 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 73815382762 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40