bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3566_orf2 Length=251 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0391 318 1e-85 > 5833.PF14_0391 Length=217 Score = 318 bits (815), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 150/217 (69%), Positives = 184/217 (84%), Gaps = 0/217 (0%) Query 35 MSKLSQETLNAAIASILKGSQEKKRKFVETIELQISLKDYDTQRDKRFSGSVRLPHVPRA 94 MSKL+Q+ L AI+ + +G+++KKRKFVETIELQI LKDYDTQRDKRFSG+VRL + R Sbjct 1 MSKLNQDLLKKAISDVFEGTKQKKRKFVETIELQIGLKDYDTQRDKRFSGTVRLSNEVRK 60 Query 95 KSKVCVIGDAVHMEEAKALGLDCMDVEALKKINKNKKIVKKLARKYDAFLASQALIPQIP 154 K KVC++GDAVH+EEA+ L LD MD+EA+KK+NK+K +VKKLA+KYDAFLASQ ++PQIP Sbjct 61 KLKVCILGDAVHVEEAQKLELDYMDIEAMKKLNKDKTLVKKLAKKYDAFLASQVILPQIP 120 Query 155 RYLGPGLNKAGKFPTLITHQDKIEDKILEVRSSVKFQLKKVLCMGVAVANVEMTEAQVRY 214 + LGPGLNKAGKFP+LITH DKI DKILE++SS+KFQLKKVLCMGV V + + E ++R Sbjct 121 KLLGPGLNKAGKFPSLITHNDKINDKILELKSSIKFQLKKVLCMGVPVGHANLKEEELRS 180 Query 215 NLTMAINFLVSLLKKNWNNVKRLHIKSTMGKCHTIYG 251 N+ AINFLVSLLKKNW N++ LHIKSTMGK IYG Sbjct 181 NIVHAINFLVSLLKKNWQNIRTLHIKSTMGKPQRIYG 217 Lambda K H 0.318 0.134 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 76235559246 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40