bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3561_orf2 Length=197 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0571 60.5 3e-08 > 5833.PF14_0571 Length=334 Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 2/102 (1%) Query 95 KKKHLAKIYAALTSNVLATALGVYVHLNCFALPNFLALLLSLACVLALSFSSQKAHAESK 154 ++ HL KIY L + +AL YV + F +P F+A ++SL C L+ SS +H + Sbjct 120 ERNHLIKIYGLLAMGTIVSALSCYVDIYYFKVPRFIASIISLVCSFLLA-SSCNSHYQLV 178 Query 155 MLTGERALYFGGFGFLNGMLAGNYLAAVHFYVGPQVVPAAFL 196 + +R +YF G G+L +Y+ V+ Y+ P ++P AF Sbjct 179 DTSKKRLVYFAGISSSIGVLISDYINYVN-YLNPSILPLAFF 219 Lambda K H 0.329 0.141 0.448 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 46738269100 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40