bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3538_orf2 Length=123 Score E Sequences producing significant alignments: (Bits) Value 5833.PF08_0031 145 3e-34 > 5833.PF08_0031 Length=318 Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 68/122 (55%), Positives = 89/122 (72%), Gaps = 0/122 (0%) Query 1 ALCTGLTAGMLATNDQCKEMLTPTLGNGWTTTLTASAISGFFAVTFSLPFDFLKTRLQKM 60 A L GML+T DQ KE L LG G T L AS ISGFFAVT SLPFDF+KT +QKM Sbjct 196 ARAMSLNLGMLSTYDQSKEFLQKYLGVGMKTNLVASVISGFFAVTLSLPFDFVKTCMQKM 255 Query 61 RPDPLTGELPYKGVFDAAVKITRTEGITAFYTGYPTYYMRIAPHAMITLISMDYLDRALR 120 + DP+T ++PYK + D ++++ + GI+ FY+ Y TYY+RIAPHAMITLI++DYL+ L+ Sbjct 256 KADPVTKKMPYKNMLDCSIQLYKKGGISIFYSSYATYYVRIAPHAMITLITVDYLNNLLK 315 Query 121 KL 122 K+ Sbjct 316 KI 317 Lambda K H 0.325 0.138 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22834639773 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40