bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3535_orf1 Length=277 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd6_2450 400 3e-110 > 5807.cgd6_2450 Length=901 Score = 400 bits (1027), Expect = 3e-110, Method: Compositional matrix adjust. Identities = 189/275 (68%), Positives = 227/275 (82%), Gaps = 3/275 (1%) Query 3 FDVGRYLESVRERQNAESISAVLYPNDNTMEGKELRLKQQYFFCCATIQDVLRRFKKVPG 62 F+ G+Y+++V RQ AE I++VLYPNDNT +GKELRLKQQYFF CATIQD+LRRFKK Sbjct 300 FNEGKYVDAVCARQRAEYITSVLYPNDNTEQGKELRLKQQYFFVCATIQDILRRFKKSGK 359 Query 63 RDWKELPDKIQCQLNDTHPTIAIPELMRILLDVEGLDWDTAWDLTRRCFNYTNHTVLPEA 122 DW ELP K+ CQLNDTHPTIA+ E+MRIL+DVE LDWD AW++T CFNYTNHTVLPEA Sbjct 360 VDWSELPKKVSCQLNDTHPTIAVAEMMRILIDVEELDWDFAWNITSECFNYTNHTVLPEA 419 Query 123 LEKWSADLISRLLPRHLLIINEINFRFLNEARSIFGDD-WNKIGRMSIYEEGNEKRIRMA 181 LEKWS+ L S+LLPRHL+IINEIN+RFLN+ R++ GD W I +MSIYEEG +K+IRMA Sbjct 420 LEKWSSSLFSKLLPRHLMIINEINYRFLNDVRAVLGDGPW--ISKMSIYEEGWDKKIRMA 477 Query 182 NLAVIGGRHVNGVAAIHSELVKKNLFPEFDEFYSRQGVNDKFLNVTNGVTPRRWIYCSNR 241 NLAVIG R VNGVA IHSE+VKK+LF +F E+Y R+G+NDKF+NVTNGVTPRRW+ C+N Sbjct 478 NLAVIGCRKVNGVAVIHSEIVKKDLFSDFVEYYRRKGINDKFINVTNGVTPRRWVNCANP 537 Query 242 GLADLFSNWLGSDSWLKELDMIAGLMNHIDNPSFR 276 L+ L SNWLGSDSWL DMI L N+ID+ S + Sbjct 538 KLSHLISNWLGSDSWLTNFDMIRSLQNNIDDLSLQ 572 Lambda K H 0.323 0.139 0.439 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 90986687595 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40