bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_3510_orf3
Length=435
Score E
Sequences producing significant alignments: (Bits) Value
235909.GK0078 357 5e-97
> 235909.GK0078
Length=810
Score = 357 bits (916), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 189/368 (51%), Positives = 257/368 (69%), Gaps = 14/368 (3%)
Query 18 DEIHTLIGAGKAAGSMDASQMLKVPLARGEIVLIGATTLSEYKLYLEKDAAFCRRFQKIL 77
DE+HTLIGAG A G++DAS +LK LARGE+ IGATTL EY+ Y+EKDAA RRFQ I
Sbjct 279 DELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKYIEKDAALERRFQPIY 338
Query 78 VEAPSKERTLSILRKVKGNYEAHHSLQIPDLLLSQIVQLSDQLLKRRAFPDKALDLLDEA 137
V+ P+ E ++ IL+ ++ YEAHH + I D + Q V+LSD+ + R PDKA+DL+DEA
Sbjct 339 VDEPTVEESIQILKGLRDRYEAHHRVSISDEAIVQAVKLSDRYITDRFLPDKAIDLIDEA 398
Query 138 CAFRRVRHNSRRAELALL------LQQQRDGKTHFAEEELAA--------LQAEYAEMTE 183
C+ R+R + +L L +++++D E E AA L+ E E
Sbjct 399 CSKVRLRSFTAPPKLKELEQKLEEVRKEKDAAVQSQEFEKAASLRDMEQRLREELEETKR 458
Query 184 PTEERPDPEVLELQMDDVAHVLSLWTGIPVGRMTEDEATRVLKLADLLSKRVIGQDEAVQ 243
+E+ E LE+ ++D+A V+S WTGIPV ++ E E R+LKL ++L RV+GQDEAV+
Sbjct 459 AWKEKQGQENLEVTVEDIAAVVSSWTGIPVSKLAETETERLLKLEEILHSRVVGQDEAVK 518
Query 244 AVANAIRNHRAGLSEDKKPIGAFLFLGSSGVGKTELAKALAEEIFHSEKNLIRLDMVEYQ 303
AVA A+R RAGL + K+PIG+F+FLG +GVGKTELA+ALAE +F E LIR+DM EY
Sbjct 519 AVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGDEDALIRIDMSEYM 578
Query 304 EAHSISRLIGPPPGYMGNDEGGQLTEAVRQKPHSVVLFDEVENAHKNLWSLLLPMLDEGH 363
E HS SRLIG PPGY+G +EGGQLTE VR+KP+SVVL DE+E AH +++++LL +L++G
Sbjct 579 EKHSTSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEMEKAHPDVFNILLQVLEDGR 638
Query 364 LTDTKQRA 371
LTD+K R
Sbjct 639 LTDSKGRT 646
Lambda K H
0.316 0.133 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 179403917360
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40