bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3510_orf3 Length=435 Score E Sequences producing significant alignments: (Bits) Value 235909.GK0078 357 5e-97 > 235909.GK0078 Length=810 Score = 357 bits (916), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 189/368 (51%), Positives = 257/368 (69%), Gaps = 14/368 (3%) Query 18 DEIHTLIGAGKAAGSMDASQMLKVPLARGEIVLIGATTLSEYKLYLEKDAAFCRRFQKIL 77 DE+HTLIGAG A G++DAS +LK LARGE+ IGATTL EY+ Y+EKDAA RRFQ I Sbjct 279 DELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEYRKYIEKDAALERRFQPIY 338 Query 78 VEAPSKERTLSILRKVKGNYEAHHSLQIPDLLLSQIVQLSDQLLKRRAFPDKALDLLDEA 137 V+ P+ E ++ IL+ ++ YEAHH + I D + Q V+LSD+ + R PDKA+DL+DEA Sbjct 339 VDEPTVEESIQILKGLRDRYEAHHRVSISDEAIVQAVKLSDRYITDRFLPDKAIDLIDEA 398 Query 138 CAFRRVRHNSRRAELALL------LQQQRDGKTHFAEEELAA--------LQAEYAEMTE 183 C+ R+R + +L L +++++D E E AA L+ E E Sbjct 399 CSKVRLRSFTAPPKLKELEQKLEEVRKEKDAAVQSQEFEKAASLRDMEQRLREELEETKR 458 Query 184 PTEERPDPEVLELQMDDVAHVLSLWTGIPVGRMTEDEATRVLKLADLLSKRVIGQDEAVQ 243 +E+ E LE+ ++D+A V+S WTGIPV ++ E E R+LKL ++L RV+GQDEAV+ Sbjct 459 AWKEKQGQENLEVTVEDIAAVVSSWTGIPVSKLAETETERLLKLEEILHSRVVGQDEAVK 518 Query 244 AVANAIRNHRAGLSEDKKPIGAFLFLGSSGVGKTELAKALAEEIFHSEKNLIRLDMVEYQ 303 AVA A+R RAGL + K+PIG+F+FLG +GVGKTELA+ALAE +F E LIR+DM EY Sbjct 519 AVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGDEDALIRIDMSEYM 578 Query 304 EAHSISRLIGPPPGYMGNDEGGQLTEAVRQKPHSVVLFDEVENAHKNLWSLLLPMLDEGH 363 E HS SRLIG PPGY+G +EGGQLTE VR+KP+SVVL DE+E AH +++++LL +L++G Sbjct 579 EKHSTSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEMEKAHPDVFNILLQVLEDGR 638 Query 364 LTDTKQRA 371 LTD+K R Sbjct 639 LTDSKGRT 646 Lambda K H 0.316 0.133 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 179403917360 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40