bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_3494_orf2
Length=179
Score E
Sequences producing significant alignments: (Bits) Value
3702.AT3G06720.2 252 4e-66
> 3702.AT3G06720.2
Length=532
Score = 252 bits (643), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 122/177 (68%), Positives = 141/177 (79%), Gaps = 1/177 (0%)
Query 1 KRVCAAGAVPHFVRFLAMEGREQLQFEAAWALTNIASGTQEQTRVVVDCGAVPCFVQLLR 60
+ V +AG VP FV FL E +QFEAAWALTNIASGT + T+VV+D AVP FVQLL
Sbjct 109 EEVISAGVVPRFVEFLKKEDYPAIQFEAAWALTNIASGTSDHTKVVIDHNAVPIFVQLLA 168
Query 61 SPKEEVREQAVWALGNIAGDSPSCRDLVLDSDALQPLLEQLNTPGSKLAMLRNATWTLSN 120
SP ++VREQAVWALGN+AGDSP CRDLVL AL PLL QLN +KL+MLRNATWTLSN
Sbjct 169 SPSDDVREQAVWALGNVAGDSPRCRDLVLGCGALLPLLNQLNE-HAKLSMLRNATWTLSN 227
Query 121 FCRGKPAPAFEKVSPALPTLAALIYSDDAEVLTDACWAVSYLSDGPNERIEAVLQAG 177
FCRGKP P F++V PALP L LI+SDD EVLTDACWA+SYLSDG N++I+ V+QAG
Sbjct 228 FCRGKPQPHFDQVKPALPALERLIHSDDEEVLTDACWALSYLSDGTNDKIQTVIQAG 284
Lambda K H
0.319 0.132 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 36430169559
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40