bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3489_orf1 Length=388 Score E Sequences producing significant alignments: (Bits) Value 5833.PFE1455w 213 8e-54 > 5833.PFE1455w Length=548 Score = 213 bits (542), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 119/341 (34%), Positives = 188/341 (55%), Gaps = 9/341 (2%) Query 3 RVDLQAIAVSVITVGSTSCGLLHGVLGS-SLGPSVEATRFRFLLLGFIYALLFLFGTLLM 61 R LQ + VGS SC LL+G+LGS S G + + + ++ FIY++L+L G + Sbjct 206 RTRLQLFTWYISVVGSMSCSLLNGLLGSFSEGYTYKEKKKNMFIITFIYSILYLCGIFIT 265 Query 62 LFVVKEETLEPQYPPQTLTLSQWLHAGVYSA-QQMFLNVPFFLLMVAYSCMIMAGAVTPM 120 + V+ + Y + Q +A Y + MF N PF LL++ YS ++ GAV M Sbjct 266 VLVL----INKDYKSKE-DFVQLSYANNYKMIKNMFNNRPFILLVICYSFTLLCGAVCCM 320 Query 121 LLPYFCKHVVQSREAFDWAPLLFTASAVGGMPLWVFLGSSYLKVEKKWRFVLAGVWVGFF 180 LLPYFC+++++S +W+PL FT S + G+P W+++ EKK++++L+ + Sbjct 321 LLPYFCRYIIESNFLINWSPLFFTTSMIIGIPFWIYINKILSINEKKYKYILSSGLLCIS 380 Query 181 LGLSALIVKPGDNALFISLSIIGGLGMGGYFATPEAMKPDVVDYDEFRTGARHEARFAGV 240 L +L+V D+ LF+ IIGG+ G +F+ E+MK DV+DY+EF G R+ +AG+ Sbjct 381 LTTCSLVVHKNDDVLFLFFCIIGGVTTGSFFSISESMKGDVIDYNEFLYGIRNYTTYAGI 440 Query 241 FMFFANICAGIALEVMLLLLDNFGYDGSKQIGEPEPQKVVLLLRVGFGSTLLLLLLLIVP 300 FM +NI AGI L++ L ++ F D + + G + Q V +R + + L +I+ Sbjct 441 FMCISNIIAGIGLKLSLYYINIFN-DINSRNGYNKKQ-FVRAIRSSLCTFICLTFFVILI 498 Query 301 AMACYPITRQKHADILAAIQKRLEGQHAADPLYGGPPLPPY 341 M YPI + H IL I+ R GQ DPL G L P+ Sbjct 499 TMFFYPIDKFNHKKILHGIRMRKTGQCVEDPLNPGKILLPF 539 Lambda K H 0.326 0.142 0.434 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 152897957178 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40