bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_3489_orf1
Length=388
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFE1455w 213 8e-54
> 5833.PFE1455w
Length=548
Score = 213 bits (542), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 188/341 (55%), Gaps = 9/341 (2%)
Query 3 RVDLQAIAVSVITVGSTSCGLLHGVLGS-SLGPSVEATRFRFLLLGFIYALLFLFGTLLM 61
R LQ + VGS SC LL+G+LGS S G + + + ++ FIY++L+L G +
Sbjct 206 RTRLQLFTWYISVVGSMSCSLLNGLLGSFSEGYTYKEKKKNMFIITFIYSILYLCGIFIT 265
Query 62 LFVVKEETLEPQYPPQTLTLSQWLHAGVYSA-QQMFLNVPFFLLMVAYSCMIMAGAVTPM 120
+ V+ + Y + Q +A Y + MF N PF LL++ YS ++ GAV M
Sbjct 266 VLVL----INKDYKSKE-DFVQLSYANNYKMIKNMFNNRPFILLVICYSFTLLCGAVCCM 320
Query 121 LLPYFCKHVVQSREAFDWAPLLFTASAVGGMPLWVFLGSSYLKVEKKWRFVLAGVWVGFF 180
LLPYFC+++++S +W+PL FT S + G+P W+++ EKK++++L+ +
Sbjct 321 LLPYFCRYIIESNFLINWSPLFFTTSMIIGIPFWIYINKILSINEKKYKYILSSGLLCIS 380
Query 181 LGLSALIVKPGDNALFISLSIIGGLGMGGYFATPEAMKPDVVDYDEFRTGARHEARFAGV 240
L +L+V D+ LF+ IIGG+ G +F+ E+MK DV+DY+EF G R+ +AG+
Sbjct 381 LTTCSLVVHKNDDVLFLFFCIIGGVTTGSFFSISESMKGDVIDYNEFLYGIRNYTTYAGI 440
Query 241 FMFFANICAGIALEVMLLLLDNFGYDGSKQIGEPEPQKVVLLLRVGFGSTLLLLLLLIVP 300
FM +NI AGI L++ L ++ F D + + G + Q V +R + + L +I+
Sbjct 441 FMCISNIIAGIGLKLSLYYINIFN-DINSRNGYNKKQ-FVRAIRSSLCTFICLTFFVILI 498
Query 301 AMACYPITRQKHADILAAIQKRLEGQHAADPLYGGPPLPPY 341
M YPI + H IL I+ R GQ DPL G L P+
Sbjct 499 TMFFYPIDKFNHKKILHGIRMRKTGQCVEDPLNPGKILLPF 539
Lambda K H
0.326 0.142 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 152897957178
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40