bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3482_orf1 Length=305 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0614 86.7 1e-15 > 5833.PF14_0614 Length=1502 Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 28/172 (16%) Query 14 DLLTNYQVDAYISGHDHALEYVSLTDLDKNSTLAFITSGGGTRVM--GGAAGRGWLGLLR 71 D L NY VDAY S HDH +EY+ +D +G +RV+ + GRG+ G + Sbjct 924 DFLFNYHVDAYFSAHDHLMEYIKFGSVD------LFINGSSSRVLFDNSSMGRGYFGKII 977 Query 72 GKLFPVLCWAGKRIFYKLDPGGCRPSEKDQALAYKFYAPHGASWRLSVKERVLNATGFAA 131 GKL+P+ C+ K I L P GC + K+Y + GF+ Sbjct 978 GKLYPLSCYVLKTIHTGLKPKGCNINRYS-----KWYNK--------------SDIGFST 1018 Query 132 LQLSRDFLVVDFVDGRSGRPTGRRLHKRSNREARAAKFLDFWEEADLKLKEL 183 +L++D LV F+ R+G+P ++ ++ + R KF D A+ ++KEL Sbjct 1019 HKLTKDELVTQFISSRTGKPLSEKIITKNKKHER-KKFYDLDGFAEDRIKEL 1069 Lambda K H 0.319 0.135 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 106813807282 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40