bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_3480_orf2
Length=159
Score E
Sequences producing significant alignments: (Bits) Value
3702.AT1G28350.1 145 5e-34
> 3702.AT1G28350.1
Length=776
Score = 145 bits (365), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 95/131 (72%), Gaps = 1/131 (0%)
Query 30 KDRKKMSKSNADSAIFMEDSEAEVNRKIRKAFCPPAQVHGNPCVAYVERLVFP-DKEFHV 88
+ +KKMSKS+ SAIFMED EAEVN KI+KA+CPP V GNPC+ YV+ ++ P EF V
Sbjct 269 QGQKKMSKSDPSSAIFMEDEEAEVNVKIKKAYCPPDIVEGNPCLEYVKHIILPWFSEFTV 328
Query 89 QRTLENGGNIVFKTAEEFKRSFAAGELHPADLKAALAREINRQLEPVRRHFQTDENAKKL 148
+R + GGN FK+ E+ + +G+LHP DLK AL++ +N+ L+PVR HF+T+ AK L
Sbjct 329 ERDEKYGGNRTFKSFEDITTDYESGQLHPKDLKDALSKALNKILQPVRDHFKTNSRAKNL 388
Query 149 LQEISKYKITR 159
L+++ YK+TR
Sbjct 389 LKQVKGYKVTR 399
Lambda K H
0.320 0.132 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 26246233818
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40