bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3479_orf2 Length=175 Score E Sequences producing significant alignments: (Bits) Value 5833.PFE0810c 233 3e-60 > 5833.PFE0810c Length=151 Score = 233 bits (593), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 109/123 (88%), Positives = 119/123 (96%), Gaps = 0/123 (0%) Query 42 GPQTREDELVFGVAHIYASFNDTFIHVTDLSGRETLVRVTGGMKVKADRDESSPYAAMMA 101 GPQ +E ELVFGVAHI+ASFNDTFIHVTDLSGRETLVR+TGGMKVKADRDESSPYAAMMA Sbjct 18 GPQPKEGELVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMMA 77 Query 102 AGDVAARCKELGITAVHVRVRATGGTKSKTPGPGAQSALRALARSGLRIGRIEDVTPIPT 161 A DVAAR KELG+TA+H+++RA+GGTKSKTPGPGAQSALRALARSGL+IGRIEDVTPIPT Sbjct 78 AQDVAARLKELGVTAIHIKLRASGGTKSKTPGPGAQSALRALARSGLKIGRIEDVTPIPT 137 Query 162 DST 164 DST Sbjct 138 DST 140 Lambda K H 0.314 0.128 0.356 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 34716851512 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40