bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_3463_orf1
Length=198
Score E
Sequences producing significant alignments: (Bits) Value
338963.Pcar_2672 73.9 3e-12
> 338963.Pcar_2672
Length=399
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 74/137 (54%), Gaps = 21/137 (15%)
Query 47 GAVLKGVVKNIRPFGAFILTSQYARECLLHISNISRQRVENVEDALKMGQ--EVWVKVLK 104
G V+KG V ++R FGAFI E LL IS IS RVEN+ED L +GQ E+ +K L
Sbjct 204 GMVVKGTVTSLRDFGAFIDIGGL--EGLLPISEISYGRVENIEDVLHVGQELELAIKKLD 261
Query 105 EEPDGRVSVSMKDVNQEDGSEITSLFDSFNNRGVGGGVKIPELNSIHRGTVKRIQAFGAF 164
+ D R S S++D + S++ +L+ S H GTV R+ FGAF
Sbjct 262 WQAD-RFSFSLRDTQADPWSKVGTLYME---------------GSTHTGTVARLANFGAF 305
Query 165 VALDGFDRDGLLHISCI 181
V L+ DGL+HIS +
Sbjct 306 VTLE-EGVDGLIHISKL 321
Lambda K H
0.320 0.139 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 46549540124
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40