bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3426_orf4 Length=106 Score E Sequences producing significant alignments: (Bits) Value 51511.ENSCSAVP00000017227 169 2e-41 > 51511.ENSCSAVP00000017227 Length=230 Score = 169 bits (428), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 97/105 (92%), Positives = 104/105 (99%), Gaps = 0/105 (0%) Query 2 TKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEEIRGV 61 TKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEE RGV Sbjct 126 TKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGV 185 Query 62 LKVFLENIIKDSVTYTEHARRKTVTAMDIVYSLKRQGRTLYGFGG 106 LKVFLEN+I+D+VTYTEHA+RKTVTA+D+VY+LKRQGRTLYGFGG Sbjct 186 LKVFLENVIRDAVTYTEHAKRKTVTALDVVYALKRQGRTLYGFGG 230 Lambda K H 0.321 0.141 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22605445551 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40