bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3401_orf1 Length=156 Score E Sequences producing significant alignments: (Bits) Value 5833.PF08_0085 255 3e-67 > 5833.PF08_0085 Length=163 Score = 255 bits (651), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 113/153 (73%), Positives = 133/153 (86%), Gaps = 0/153 (0%) Query 2 MASHARKRLIRDFRKLQSDPPFGVSGAPVQNDIMRWHAVIFGPEDTPWEGGTFQLELKFT 61 M++ A+KRLIRDFRKLQ+D PFGVSG+P+ NDIM+W AVIFGP DTPWEGGTF LEL F Sbjct 1 MSNLAKKRLIRDFRKLQTDSPFGVSGSPIGNDIMKWRAVIFGPADTPWEGGTFHLELLFG 60 Query 62 NEYPNKPPHVRFLSRLFHPNVYTDGNICLDILQAQWSPIYDISAILTSIQSLLSDPNPSS 121 NEYPN+PP V+FL+++FHPN+Y DGNIC+DILQ WSPIYDISAILTSIQSLLSDPNP+S Sbjct 61 NEYPNRPPKVKFLTKMFHPNIYMDGNICIDILQKHWSPIYDISAILTSIQSLLSDPNPNS 120 Query 122 PANQEAARLYAENRREYNRRVQQCATESWKTVE 154 PANQEAA L+ ENR EYNRR++ C ES+ +E Sbjct 121 PANQEAALLFVENRIEYNRRIKNCVKESFNFIE 153 Lambda K H 0.318 0.134 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 24371502831 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40