bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_3400_orf1
Length=173
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFE0545c 187 1e-46
> 5833.PFE0545c
Length=171
Score = 187 bits (474), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 123/171 (71%), Gaps = 0/171 (0%)
Query 3 MKVYKCVFSGDELCSDSYPHLVPFDDDAFKDVAFEVKGTRVTKAAEDFGIADNSEEGEGG 62
MKV+K VF+ DE+CSDSY PF+ F+++AFEVK + K ED+GIADNSE+ G
Sbjct 1 MKVFKDVFTNDEVCSDSYVQQDPFEVPEFREIAFEVKSNKRIKGNEDYGIADNSEDAVEG 60
Query 63 VEDAAETVIDIINAFHLSETSLTKKDFTTYIKGYLKRVVDYLQEHNPSRVEAFKTESAAL 122
+ E VIDI+++F L+ T+ +KK+++ YIK Y+++V YL+E P RVE FKT++
Sbjct 61 MGADVEHVIDIVDSFQLTSTAFSKKEYSAYIKNYMQKVAKYLEEKKPDRVEIFKTKAQPF 120
Query 123 VKKILGSFDDFQFFMSESNDFEASLVYAYYKDEETAPRFIYLKDGLKEEKY 173
+K IL +FDDF+F+M ES D EA ++Y+YYK EE PRF+Y+ DGL EEKY
Sbjct 121 IKHILTNFDDFEFYMGESLDMEAGIIYSYYKGEEITPRFVYISDGLFEEKY 171
Lambda K H
0.316 0.135 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 33476963958
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40