bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_3375_orf6
Length=368
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF14_0573 73.2 1e-11
> 5833.PF14_0573
Length=295
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 20/147 (13%)
Query 20 PSLNVTELSFFSLDSTQKWAERHLDELVCAHLLPHLQQQKQQQKQQQKQALATGGHCLCV 79
P N + F LDSTQ +++R+ +K K + + +
Sbjct 14 PEYNCMRIHFDVLDSTQLFSKRN-------------------KKFFIKSGKLKENNTIII 54
Query 80 TAAKQTAGVGTRRGDTGEERRWVSAAGNLHATYLLPWKQNQQQLLLHLPFVAALSVQRVL 139
+ QT G+GTR +R W+S GNL +++ W +NQ + L +++ + +
Sbjct 55 SCNIQTNGIGTRDTKRNMDRYWLSDKGNLFISFIFLWNKNQMNKINCLAQTCTVAISKTI 114
Query 140 QHLGVKGSKIKWVNDVLVNNKKIAGVL 166
++ ++ ++IKW+NDVL++ KKIAG L
Sbjct 115 EYYNLR-TQIKWINDVLIDYKKIAGCL 140
Lambda K H
0.316 0.129 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 142231533063
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40