bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_3324_orf1
Length=295
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd8_440 346 6e-94
> 5807.cgd8_440
Length=321
Score = 346 bits (887), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 163/287 (56%), Positives = 215/287 (74%), Gaps = 16/287 (5%)
Query 25 EGKTDYAARRRLILQDKNKYNAPKYRFVVRVTNSRVLCQVMYATLQGDRLVCSADSQELT 84
EGKTDY ARR +I QDK KYN+PKYRFVVR+TN++V+CQ++YAT++GDR++CSADS EL
Sbjct 35 EGKTDYQARRAMISQDKTKYNSPKYRFVVRLTNTKVICQIIYATIEGDRVICSADSTELP 94
Query 85 RYGIKVGLTNYSAAYATGLLLARRLLKQKGLADEFKGLEKPSGEEYHIEEVSEERRPFKC 144
RYG+ VGL N+SAAY TGLL ARR+LKQ + F G+ + +G++YH+EE +E+RRPFKC
Sbjct 95 RYGVPVGLANFSAAYCTGLLCARRVLKQLNMDKIFTGVGEITGDDYHVEEEAEDRRPFKC 154
Query 145 VLDVGIVATTVGNRVFGAMKGACDGGLHIPHSNKRFPGFTKGEDGADDSYNPEVHRARIY 204
+LDVG+ TT GNRVF AMKGA DGG++IPHS RFPGFTKGE+GA+DS++ EV + RI
Sbjct 155 ILDVGLTRTTSGNRVFAAMKGATDGGIYIPHSPNRFPGFTKGENGAEDSFDAEVLKDRIL 214
Query 205 GLHVAEYMRTLKEEDPERYQAQFSAYIRNKIDPDSIEKMYEEAFQKIRANP--------- 255
G H++ YM ++E+DPE+Y+A FS YI+ I D + MY+ A + I A+P
Sbjct 215 GKHISNYMSEMQEDDPEKYKAHFSQYIKAGITADKLADMYKNAVKAIHADPSRQKKPARK 274
Query 256 -------DPVKTAKSQYVRNVKLDKETRKERVLKKIQMVADKMAEEE 295
+ +KT KSQYVR+VKL + RKERV KKI++VA A+EE
Sbjct 275 VTKTRVGNTIKTEKSQYVRHVKLTNQQRKERVQKKIELVAQLAAQEE 321
Lambda K H
0.318 0.135 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 100813031592
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40