bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3324_orf1 Length=295 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd8_440 346 6e-94 > 5807.cgd8_440 Length=321 Score = 346 bits (887), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 163/287 (56%), Positives = 215/287 (74%), Gaps = 16/287 (5%) Query 25 EGKTDYAARRRLILQDKNKYNAPKYRFVVRVTNSRVLCQVMYATLQGDRLVCSADSQELT 84 EGKTDY ARR +I QDK KYN+PKYRFVVR+TN++V+CQ++YAT++GDR++CSADS EL Sbjct 35 EGKTDYQARRAMISQDKTKYNSPKYRFVVRLTNTKVICQIIYATIEGDRVICSADSTELP 94 Query 85 RYGIKVGLTNYSAAYATGLLLARRLLKQKGLADEFKGLEKPSGEEYHIEEVSEERRPFKC 144 RYG+ VGL N+SAAY TGLL ARR+LKQ + F G+ + +G++YH+EE +E+RRPFKC Sbjct 95 RYGVPVGLANFSAAYCTGLLCARRVLKQLNMDKIFTGVGEITGDDYHVEEEAEDRRPFKC 154 Query 145 VLDVGIVATTVGNRVFGAMKGACDGGLHIPHSNKRFPGFTKGEDGADDSYNPEVHRARIY 204 +LDVG+ TT GNRVF AMKGA DGG++IPHS RFPGFTKGE+GA+DS++ EV + RI Sbjct 155 ILDVGLTRTTSGNRVFAAMKGATDGGIYIPHSPNRFPGFTKGENGAEDSFDAEVLKDRIL 214 Query 205 GLHVAEYMRTLKEEDPERYQAQFSAYIRNKIDPDSIEKMYEEAFQKIRANP--------- 255 G H++ YM ++E+DPE+Y+A FS YI+ I D + MY+ A + I A+P Sbjct 215 GKHISNYMSEMQEDDPEKYKAHFSQYIKAGITADKLADMYKNAVKAIHADPSRQKKPARK 274 Query 256 -------DPVKTAKSQYVRNVKLDKETRKERVLKKIQMVADKMAEEE 295 + +KT KSQYVR+VKL + RKERV KKI++VA A+EE Sbjct 275 VTKTRVGNTIKTEKSQYVRHVKLTNQQRKERVQKKIELVAQLAAQEE 321 Lambda K H 0.318 0.135 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 100813031592 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40