bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_3299_orf1
Length=171
Score E
Sequences producing significant alignments: (Bits) Value
357808.RoseRS_0190 107 1e-22
> 357808.RoseRS_0190
Length=272
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 86/151 (56%), Gaps = 9/151 (5%)
Query 22 SFLQKLTRRIKEHGTILCVGIDP-PLACPTTDDLRGSNRQQLLEDLHEKCVCLIRRTSDF 80
+F + + + + + LC+G+DP P+ P + E ++ C ++ TSD
Sbjct 2 TFRETVCATARRNRSWLCIGLDPEPMRMPV-------HLPADAEGVYAFCAAIMDATSDL 54
Query 81 VCCFKPNVAFFEQYGSGGMEVLQRLCREIPEDIPIILDAKRAATDEAAEAMANAFYSAYN 140
VC FKPN+AFFE +G+ G L+RL R P PIILDAKR AEA A A + +
Sbjct 55 VCAFKPNIAFFEAFGAAGWSALERLIRLRPGP-PIILDAKRGDIGSTAEAYARAAFEVLD 113
Query 141 ADCVTLDPYLGEGAILPFIKEKGKGVFVVCR 171
AD VT++PYLG A+ PF++ +G F++C+
Sbjct 114 ADAVTVNPYLGGDALEPFLRHSQRGCFILCK 144
Lambda K H
0.324 0.140 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 32237076404
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40