bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3269_orf1 Length=346 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd6_2450 394 2e-108 > 5807.cgd6_2450 Length=901 Score = 394 bits (1012), Expect = 2e-108, Method: Compositional matrix adjust. Identities = 179/281 (63%), Positives = 219/281 (77%), Gaps = 0/281 (0%) Query 1 LNIIYIIHRYLTLKRMQPADRSNMLPRACLIGGKAAPGYYTAKTIIKMANNVAQIVNNDP 60 LN+ YIIHRYLTLK + P +R +PR C GGKAAPGY TAKT IKM NN++ I+NNDP Sbjct 619 LNLFYIIHRYLTLKHISPEERKKFVPRCCFFGGKAAPGYATAKTAIKMMNNLSVIINNDP 678 Query 61 DVDKYLKVVFLPNYNVSNAQVIIPASDISQHISTAGTEASGTSNMKFVMNGGLIIGTLDG 120 D YL VFLPNYNVSNAQ+IIPASDISQHISTAGTEASGTSNMKFVMNGGLIIGTLDG Sbjct 679 DTKDYLMCVFLPNYNVSNAQIIIPASDISQHISTAGTEASGTSNMKFVMNGGLIIGTLDG 738 Query 121 ANIEIREEGGDETMFIFGAKEHEVDHVRERARNGSYPMDHRMREVFDWIRSGALACGDDK 180 AN+EIREE G+ETMFIFGA E EV+H+R RAR G+YP+D R+ +VF++IR+G + GD K Sbjct 739 ANVEIREECGNETMFIFGALEQEVEHIRNRAREGNYPIDQRLHDVFNFIRTGGIMLGDGK 798 Query 181 SHGDFCAILDTICNNGSGNNGDYYLLMHDFPDYCRAQDEVDRTYKNPDKWWRLSIKAAAS 240 + G+FC I++ IC+NG G GD+YL+ HDFP YC AQ VD+ Y++ W + IKAA+S Sbjct 799 AQGEFCEIVNKICSNGEGQIGDFYLVCHDFPLYCDAQMRVDQAYRDQTTWVKTCIKAASS 858 Query 241 MGKFSTDRCMREYAEKIWGISRCERPPPDEVLRARSFANDK 281 MGKFSTDR + EYA IW + +CERP P+ + ++ +K Sbjct 859 MGKFSTDRTIEEYATAIWELEQCERPAPEACKKLSGYSPNK 899 Lambda K H 0.315 0.132 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 129139090689 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40