bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3253_orf1 Length=281 Score E Sequences producing significant alignments: (Bits) Value 5833.PFI0920c 249 8e-65 > 5833.PFI0920c Length=577 Score = 249 bits (636), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 128/264 (48%), Positives = 179/264 (67%), Gaps = 18/264 (6%) Query 25 VCRFFLSGGSNPQNVAEAATWAELAGYDEVNLNVGCPSCRVVDKGSFGAALMRSPTKVRD 84 VC+ GG + +++EAA E AGYDE+N+NVGCPS +V +KG+FGA+LM++P +VR+ Sbjct 257 VCQL---GGCDMNSMSEAAILVEQAGYDEININVGCPSTKVANKGAFGASLMKNPEQVRN 313 Query 85 IVYEMKRRVQIPVTVKCRLGVDNLDSPEFTKQFVETVSQGGCKHFIVHARKAWLQGVDPK 144 IVYE+K++VQIPVTVK R GVDN DS +F K F+ETVS GC HFIVHARKAWL+G+DPK Sbjct 314 IVYEIKKKVQIPVTVKIRTGVDNYDSFDFLKTFIETVSSVGCNHFIVHARKAWLKGLDPK 373 Query 145 KNRSVPPLLYHRVFELQEAFPELHFSLNGGVTTLELAQQLLKG---EWKAGDTAEAKDP- 200 +NR +PPL Y++V++L + +P L F+LNGG+ T++ A LL G E + D Sbjct 374 QNRKIPPLEYYKVYDLCKLYPHLKFTLNGGIQTIQEAIALLNGYMPENYNNNNNNNNDTS 433 Query 201 ---QIPDADVTNGSQYSGLYGVMIGRAAMNDPCCLAQADKLIYGSRENPESAQCRRSLLL 257 QI + ++ + L G+MIGRA M + L+Q DKL+Y +++ P +A RR++L Sbjct 434 NFIQIDNYNI------NPLNGIMIGRACMENITVLSQTDKLVY-NQDIPSTAYSRRTILE 486 Query 258 AYIDYLERYEARHRKQKSPFVLLK 281 AY YLE+ + S F LLK Sbjct 487 AYKKYLEK-NSLFYNLSSSFELLK 509 Lambda K H 0.320 0.135 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 93396930975 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40