bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3249_orf2 Length=171 Score E Sequences producing significant alignments: (Bits) Value 203124.Tery_0907 114 1e-24 > 203124.Tery_0907 Length=575 Score = 114 bits (284), Expect = 1e-24, Method: Composition-based stats. Identities = 52/98 (53%), Positives = 69/98 (70%), Gaps = 4/98 (4%) Query 74 RHMVLVFDFGSQVSRLIIRRLRAVGVYAELLSCTATLEEVAAARPAAVVLSGGPSSVYEE 133 R M+++ DFGSQ S LI RR+R VY+E++S T ++A P ++LSGGP+SVY+E Sbjct 59 RQMIVILDFGSQYSELIARRIRETQVYSEVISYRTTAAKLADINPKGIILSGGPNSVYDE 118 Query 134 GAPHLRREVWQLLQQQQIPILGICYGMQEIVQQLGGSV 171 GAPH E+W L IPILG+CYGMQ +V+QLGG V Sbjct 119 GAPHCDPEIWNL----GIPILGVCYGMQLMVKQLGGEV 152 Lambda K H 0.322 0.136 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 32237076404 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40