bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_3247_orf1
Length=247
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFI1670c 259 4e-68
> 5833.PFI1670c
Length=221
Score = 259 bits (663), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 123/218 (56%), Positives = 162/218 (74%), Gaps = 0/218 (0%)
Query 24 MVKFILNEAKDKAQEIEARALEDFNIEKLKLVQQMKDKIRQEFDKKAKKLEVQRSIDRST 83
MV FILNEAKDKA EIEA+ALEDFNIEKL++VQ+MK+KIR EF KKAK++E++RSI RS+
Sbjct 1 MVNFILNEAKDKAHEIEAKALEDFNIEKLRIVQKMKEKIRVEFQKKAKQMEIKRSIARSS 60
Query 84 AINKARLRRIAAQDQVVTEVYAQSQKQLATICSDTARYKELLTDLIVQGLLRLLEPEVVI 143
AINKARL+++ A+DQV E+Y S +L + D +YK L+ DLIVQ L + EP V++
Sbjct 61 AINKARLKKMCAKDQVFKEIYKISSDKLNDLYKDKDKYKNLIVDLIVQSLFYMQEPHVIV 120
Query 144 RCREVDRSVVESVLPAAAAKYSKILNDEAGLKKTVKLSIDKLGRYLPPPPTADSTVPSCC 203
RCR++D++VVES L A +KY+ L + + KTVK+ +DK G YLPPPPT ++ SC
Sbjct 121 RCRDIDKAVVESSLNEAVSKYTDKLKKQFNVTKTVKIELDKSGNYLPPPPTPENEGNSCL 180
Query 204 GGVILVTADGRISCDNTLDARLKLVVTECAPAIRMHLF 241
GGVIL T + +I+CDNTLD RLKL + C P I+ F
Sbjct 181 GGVILTTPNRKINCDNTLDVRLKLAIEYCTPEIKRMFF 218
Lambda K H
0.318 0.131 0.359
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 73815382762
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40