bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_3231_orf1
Length=262
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF10_0086 307 2e-82
> 5833.PF10_0086
Length=242
Score = 307 bits (787), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 137/232 (59%), Positives = 180/232 (77%), Gaps = 0/232 (0%)
Query 17 LDKVSTADLLEELKRRYNCLSKPEGRYVFLGAPGSGKGTQSANLQQTHCYCHISTGDMLR 76
L+ ST DLL ELKRRY CLSKP+GRY+FLGAPGSGKGTQS NL+++HCYCH+STGD+LR
Sbjct 5 LENFSTIDLLNELKRRYACLSKPDGRYIFLGAPGSGKGTQSLNLKKSHCYCHLSTGDLLR 64
Query 77 DAVAAGTELGQKAKGIMAAGQLVPDDLVLELLSERIKSPDCARGFILDGYPRNQEQADAL 136
+A TELG K K I+ G+LV D +VL L+ E++K+P C +GFILDGYPRN +QA+ L
Sbjct 65 EAAEKKTELGLKIKNIINEGKLVDDQMVLSLVDEKLKTPQCKKGFILDGYPRNVKQAEDL 124
Query 137 DKLLASQKQRLDGVVYFDTPEDVLIQRISGRRVHPPSGRVYHTVFHPPKVPGKDDVTGED 196
+KLL + +LDGV YF+ P++VL+ RISGR +H PSGR+YH +F+PPKVP +DDVT E
Sbjct 125 NKLLQKNQTKLDGVFYFNVPDEVLVNRISGRLIHKPSGRIYHKIFNPPKVPFRDDVTNEP 184
Query 197 LIQRKDDNEETLRKRLQVFKQQTLPLVQRYEKQGLLQRIDGSLPAASVTNQL 248
LIQR+DDNE+ L+KRL VFK +T PL+ Y+ + LL +D + PA + ++
Sbjct 185 LIQREDDNEDVLKKRLTVFKSETSPLISYYKNKNLLINLDATQPANDLEKKI 236
Lambda K H
0.316 0.134 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 81948274920
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40