bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3231_orf1 Length=262 Score E Sequences producing significant alignments: (Bits) Value 5833.PF10_0086 307 2e-82 > 5833.PF10_0086 Length=242 Score = 307 bits (787), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 137/232 (59%), Positives = 180/232 (77%), Gaps = 0/232 (0%) Query 17 LDKVSTADLLEELKRRYNCLSKPEGRYVFLGAPGSGKGTQSANLQQTHCYCHISTGDMLR 76 L+ ST DLL ELKRRY CLSKP+GRY+FLGAPGSGKGTQS NL+++HCYCH+STGD+LR Sbjct 5 LENFSTIDLLNELKRRYACLSKPDGRYIFLGAPGSGKGTQSLNLKKSHCYCHLSTGDLLR 64 Query 77 DAVAAGTELGQKAKGIMAAGQLVPDDLVLELLSERIKSPDCARGFILDGYPRNQEQADAL 136 +A TELG K K I+ G+LV D +VL L+ E++K+P C +GFILDGYPRN +QA+ L Sbjct 65 EAAEKKTELGLKIKNIINEGKLVDDQMVLSLVDEKLKTPQCKKGFILDGYPRNVKQAEDL 124 Query 137 DKLLASQKQRLDGVVYFDTPEDVLIQRISGRRVHPPSGRVYHTVFHPPKVPGKDDVTGED 196 +KLL + +LDGV YF+ P++VL+ RISGR +H PSGR+YH +F+PPKVP +DDVT E Sbjct 125 NKLLQKNQTKLDGVFYFNVPDEVLVNRISGRLIHKPSGRIYHKIFNPPKVPFRDDVTNEP 184 Query 197 LIQRKDDNEETLRKRLQVFKQQTLPLVQRYEKQGLLQRIDGSLPAASVTNQL 248 LIQR+DDNE+ L+KRL VFK +T PL+ Y+ + LL +D + PA + ++ Sbjct 185 LIQREDDNEDVLKKRLTVFKSETSPLISYYKNKNLLINLDATQPANDLEKKI 236 Lambda K H 0.316 0.134 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 81948274920 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40