bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_3204_orf1
Length=348
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF14_0598 514 2e-144
> 5833.PF14_0598
Length=337
Score = 514 bits (1324), Expect = 2e-144, Method: Compositional matrix adjust.
Identities = 240/334 (71%), Positives = 282/334 (84%), Gaps = 0/334 (0%)
Query 11 VCRMGINGFGRIGRLVFRAAMANPNVEVVALNDPFMDVQYMAYQLKFDSVHGRYPGEVTV 70
V ++GINGFGRIGRLVFRAA ++EVVA+NDPFMD+ ++ Y LK+DSVHG++P EVT
Sbjct 3 VTKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTH 62
Query 71 KDGNLVVEGKTIQVFAEKDPAAIPWGKVGAHYICESTGVFTNKEKAGLHVSGGARKVIIS 130
DG L++ K + VFAEKDP+ IPWGK +CESTGVF KE A H+ GGA+KVI+S
Sbjct 63 ADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMS 122
Query 131 APPKDDTPMFVMGVNHEEYTSSHQVVSNASCTTNCLAPLAKVVHEKFGIVEGLMTTVHAM 190
APPKDDTP++VMG+NH +Y + +VSNASCTTNCLAPLAKV++++FGIVEGLMTTVHA
Sbjct 123 APPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHAS 182
Query 191 TANQLTVDGPSKGGKDWRAGRCAGSNIIPASTGAAKAVGKVIPSLNGKLTGMAFRVPVPD 250
TANQL VDGPSKGGKDWRAGRCA SNIIPASTGAAKAVGKV+P LNGKLTG+AFRVP+
Sbjct 183 TANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGT 242
Query 251 VSVVDLTCRLAKPAKYEDIVAAIRAAAEGPLKGILGVTEDEVVSQDFCGDKRSSIFDVKA 310
VSVVDL CRL KPAKYE++ I+ AAEGPLKGILG TEDEVVSQDF D RSSIFD+KA
Sbjct 243 VSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKA 302
Query 311 GIQLNDNFVKLVSWYDNEWGYSNRLVDLAVYMSQ 344
G+ LNDNF KLVSWYDNEWGYSNR++DLAV+++
Sbjct 303 GLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITN 336
Lambda K H
0.318 0.135 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 130329312723
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40