bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3191_orf1 Length=146 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd6_3340 189 2e-47 > 5807.cgd6_3340 Length=137 Score = 189 bits (480), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 91/127 (71%), Positives = 104/127 (81%), Gaps = 0/127 (0%) Query 20 KRRIVKKRTKRFPRFQSDRWKRLSPSWRKPKGIDCRVRRKFKGTNLMPNIGYGSNKRTRH 79 K+ I+KKRTK+F RFQSDR+ R+ P+WRKPKGIDCRVRRKFKG LMP IGYGS+ +TR Sbjct 11 KKAIIKKRTKKFTRFQSDRFLRVKPNWRKPKGIDCRVRRKFKGNYLMPKIGYGSDAKTRK 70 Query 80 MLRNGFYKFRVERPQDIDMLLMHNTKFAAEIASGVSSRKRREIVERAEQLNVLVLNKSAR 139 ML NG YKF V PQ++ MLLMHN F EIASGVSSRKRREI+ERAEQLN+ VLNK+AR Sbjct 71 MLPNGLYKFTVSNPQEVHMLLMHNKTFCVEIASGVSSRKRREILERAEQLNLKVLNKNAR 130 Query 140 LNTAEDE 146 L EDE Sbjct 131 LAIEEDE 137 Lambda K H 0.322 0.136 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22393349475 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40