bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3168_orf1 Length=175 Score E Sequences producing significant alignments: (Bits) Value 5833.PFL2095w 172 3e-42 > 5833.PFL2095w Length=115 Score = 172 bits (437), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 83/114 (72%), Positives = 95/114 (83%), Gaps = 0/114 (0%) Query 61 MSLDLQNLGVSDPFANDTTKAGGVGGNASTHLIHIRNQQRNGRKSVTTVQGLPKAFDLKK 120 M+L +QNLG++DPF N+ G G + +T+LIHIRNQQRNGRKSVTTVQGL K FDLKK Sbjct 1 MNLAIQNLGINDPFTNENIVDKGNGKSNATNLIHIRNQQRNGRKSVTTVQGLGKTFDLKK 60 Query 121 MVRALKKEFSCNGTVIEDPEHGSIIQLQGDQRQAVKEFLEREGICGAEQLRIHG 174 MVRALKKEF+CNGT+IED EHGSIIQLQGD+R VKEFL REGIC E +RIHG Sbjct 61 MVRALKKEFNCNGTIIEDIEHGSIIQLQGDKRNNVKEFLIREGICALEHIRIHG 114 Lambda K H 0.324 0.140 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 34716851512 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40