bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3133_orf2 Length=248 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd8_2890 88.2 2e-16 > 5807.cgd8_2890 Length=174 Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/154 (34%), Positives = 87/154 (56%), Gaps = 14/154 (9%) Query 90 VEYCPTCGMPFEYCEFSGAACSKQEKDVKDPTQASVVQQNEHEQQLSDELQ-EKTAINEA 148 +EYC +CG+P +YCE+ C+K K V + N+ + QL+ L+ ++T I++ Sbjct 15 IEYCKSCGLPTDYCEY--GQCTKN----KILGHNEVSEANKLDSQLNTSLKIDETQISQG 68 Query 149 -------KRGGAKKDGAKPKVVTVQKQAKRRGKCSTCVWGLEHFGVRQEQAAKLASKHFA 201 + AKK K V+T++ +++ R K T V GLE F ++ +AAK +K F+ Sbjct 69 SAQKKHEESNSAKKKKTKQNVITIKVESRARRKNVTVVNGLELFDIQLSEAAKKFAKQFS 128 Query 202 CGASFQKGQPGQMPFVEIQGDVEETIAAFLNKNF 235 CGAS KG G+ +++QGD + TIA F+ K + Sbjct 129 CGASVVKGTSGKPDHIDVQGDFDITIAEFILKIY 162 Lambda K H 0.312 0.128 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 74420426883 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40