bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_3132_orf2
Length=187
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF11_0313 157 1e-37
> 5833.PF11_0313
Length=316
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 97/124 (78%), Gaps = 0/124 (0%)
Query 62 KRREYFPRLLQLLLEHPRVLVVSADHVGSKQLAGIRVALRGQATVLMGKNTKIRTALRQQ 121
K++ Y +L L+ ++ ++L+V D+VGS Q+A +R +LRG+AT+LMGKNT+IRTAL++
Sbjct 9 KKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTRIRTALKKN 68
Query 122 LQQQPQLQALLPLVRLNVGFIFCRADPAAVRAVVQQHKVPAPAKQGVTAPTDVFIPAGPT 181
LQ PQ++ LLPLV+LN+GF+FC+ D + +R ++ +K PAPA+ GV AP DVFIP GPT
Sbjct 69 LQAVPQIEKLLPLVKLNMGFVFCKDDLSEIRNIILDNKSPAPARLGVIAPIDVFIPPGPT 128
Query 182 GMDP 185
GMDP
Sbjct 129 GMDP 132
Lambda K H
0.321 0.134 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 40588496850
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40