bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_3129_orf3
Length=301
Score E
Sequences producing significant alignments: (Bits) Value
3702.AT5G67530.1 162 2e-38
> 3702.AT5G67530.1
Length=595
Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 117/200 (58%), Gaps = 22/200 (11%)
Query 18 MPKHKHHRDRLYLLQSEYSSEWGGFKKAKLNLPYKVLPFYCCCLCFCPAKDPVCSSSGAV 77
M K +H +DR+++ ++E+++EWGG K + P+K LP+YCC L F P +DPVC+ G+V
Sbjct 1 MGKKQHSKDRMFITKTEWATEWGGAKSKENRTPFKSLPYYCCALTFLPFEDPVCTIDGSV 60
Query 78 FDRSCILSFMQQQQKLQQKQQQQQQQQQQQQQELECQCPVTGQRLRFADLFALKFFKNAK 137
F+ + I+ ++++ K PVTG L+ DL L F KN++
Sbjct 61 FEITTIVPYIRKFGK----------------------HPVTGAPLKGEDLIPLIFHKNSE 98
Query 138 GEICCPVSFKLLSENSHVAAVRSSGNVFAADTLLNLCVRTNSWNDLITGEPFTSSDIVHI 197
GE CPV K+ +E +H+ AV+++GNVF + + L ++T +W +L+T EPFT +D++ I
Sbjct 99 GEYHCPVLNKVFTEFTHIVAVKTTGNVFCYEAIKELNIKTKNWKELLTEEPFTRADLITI 158
Query 198 QNPTDAKRRCIEHFHHVLKG 217
QNP + F HV G
Sbjct 159 QNPNAVDGKVTVEFDHVKNG 178
Lambda K H
0.319 0.129 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 104413497006
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40