bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3129_orf3 Length=301 Score E Sequences producing significant alignments: (Bits) Value 3702.AT5G67530.1 162 2e-38 > 3702.AT5G67530.1 Length=595 Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 117/200 (58%), Gaps = 22/200 (11%) Query 18 MPKHKHHRDRLYLLQSEYSSEWGGFKKAKLNLPYKVLPFYCCCLCFCPAKDPVCSSSGAV 77 M K +H +DR+++ ++E+++EWGG K + P+K LP+YCC L F P +DPVC+ G+V Sbjct 1 MGKKQHSKDRMFITKTEWATEWGGAKSKENRTPFKSLPYYCCALTFLPFEDPVCTIDGSV 60 Query 78 FDRSCILSFMQQQQKLQQKQQQQQQQQQQQQQELECQCPVTGQRLRFADLFALKFFKNAK 137 F+ + I+ ++++ K PVTG L+ DL L F KN++ Sbjct 61 FEITTIVPYIRKFGK----------------------HPVTGAPLKGEDLIPLIFHKNSE 98 Query 138 GEICCPVSFKLLSENSHVAAVRSSGNVFAADTLLNLCVRTNSWNDLITGEPFTSSDIVHI 197 GE CPV K+ +E +H+ AV+++GNVF + + L ++T +W +L+T EPFT +D++ I Sbjct 99 GEYHCPVLNKVFTEFTHIVAVKTTGNVFCYEAIKELNIKTKNWKELLTEEPFTRADLITI 158 Query 198 QNPTDAKRRCIEHFHHVLKG 217 QNP + F HV G Sbjct 159 QNPNAVDGKVTVEFDHVKNG 178 Lambda K H 0.319 0.129 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 104413497006 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40